Expand description
This is the seqrepo
library.
Structs
- Provides access to the aliases database of the
SeqRepo
. - Record as returned by
AliasDb::find()
. - Sequence repository reading from a cache.
- Sequence repository reading from actual implementation and writing to a cache.
- This class provides a simple key-value interface to a directory of compressed FASTA files.
- Namespaces as stored in the database.
- A pair of namespace and alias as available in the database.
- Datastructure for a query to
AliasDb::find()
. - A record from the
db.sqlite3
database. - Provide (read-only) access to a
seqrepo
sequence repository.
Enums
- Error type for variant mapping.
Traits
- Trait describing the interface of a sequence repository.